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Build Agents for GitHub Actions

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Build and run Flue agents in GitHub Actions. This guide walks you through creating your first agent, running it locally with the CLI, and wiring it into a CI workflow.

By the end, you will have a Flue agent running inside GitHub Actions, and you will know how to use local sandbox context, external CLIs, subagents, skills, and typed results to build CI workflows.

Hello World

A minimal agent that runs in CI whenever an issue is opened.

1. Set up your project

mkdir my-flue-project && cd my-flue-project
npm init -y
npm install @flue/runtime valibot
npm install -D @flue/cli

2. Create your first agent

.flue/workflows/hello.ts:

import { defineAgent, defineWorkflow } from '@flue/runtime';
import { local } from '@flue/runtime/node';
import * as v from 'valibot';

const agent = defineAgent(() => ({ sandbox: local(), model: 'anthropic/claude-sonnet-4-6' }));

export default defineWorkflow({
  agent,
  input: v.object({ name: v.optional(v.string()) }),

  async run({ harness, input }) {
    const { data } = await (
      await harness.session()
    ).prompt(`Say hello to ${input.name ?? 'the user'} and share an interesting fact.`, {
      result: v.object({
        greeting: v.string(),
        fact: v.string(),
      }),
    });
    return data;
  },
});

A few things to note:

  • This workflow omits a public route handler, so it is internal-only and designed to be run from the CLI, which is perfect for CI.
  • model — The workflow’s required agent provides the model and sandbox policy used to initialize each run.
  • local() — The local() sandbox runs the agent directly against the host filesystem and shell. In CI, that’s the checked-out repo plus whatever binaries are on $PATH (gh, git, npm, etc.). Skills and AGENTS.md are discovered automatically from the project root. By default only shell-essential env vars (PATH, HOME, locale, etc.) are inherited from process.env — pass local({ env: { GH_TOKEN: process.env.GH_TOKEN } }) to expose more. Use local() only when the runner itself provides the isolation boundary.
  • Schemas — The Valibot schema defines the expected output shape. Flue parses the agent’s response and returns it on response.data, fully typed.

3. Test it locally

npx flue run hello --target node \
  --input '{"name": "World"}'

flue run starts the configured application temporarily, invokes the workflow through its existing flue() mount, streams progress to stderr, and prints the final result as JSON to stdout. Normal app.ts and middleware execute. The workflow does not need authored HTTP exposure because this local runtime temporarily exposes route-free resources.

4. Wire it into GitHub Actions

.github/workflows/hello.yml:

name: Hello Flue

on:
  issues:
    types: [opened]

jobs:
  hello:
    runs-on: ubuntu-latest
    permissions:
      issues: read
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-node@v4
        with:
          node-version: 22
      - run: npm ci
      - name: Run agent
        env:
          ANTHROPIC_API_KEY: ${{ secrets.ANTHROPIC_API_KEY }}
        run: |
          npx flue run hello --target node \
            --input '{"name": "${{ github.event.issue.user.login }}"}'

Add ANTHROPIC_API_KEY as a repository secret (Settings > Secrets and variables > Actions). Open an issue and you’ll see the agent’s greeting in the job logs.

Building a real agent

Now let’s build something useful — an issue triage agent that analyzes an issue and reports back. This is where Flue’s agent features start to shine.

The agent handler

The workflow Action is where orchestration lives. Its context provides the initialized harness, validated input, and structured log; the bound agent owns model and sandbox policy.

Once you have a session, you have three core methods:

  • session.shell(cmd) — Run a shell command in the sandbox. Returns { stdout, stderr, exitCode }.
  • session.prompt(text, opts) — Send a prompt to the agent and get back a result.
  • session.skill(name, opts) — Run a named skill — a reusable agent task defined by a markdown instruction file.

Both prompt() and skill() accept a result option — a Valibot schema that defines the expected output shape. Flue parses the agent’s response and returns it on response.data, fully typed:

import * as v from 'valibot';

// summary: string
const { data: summary } = await session.prompt(`Summarize this diff:\n${diff}`, {
  result: v.string(),
});

// diagnosis: { reproducible: boolean, skipped: boolean }
const { data: diagnosis } = await session.skill('triage', {
  args: { issueNumber, issue },
  result: v.object({
    reproducible: v.boolean(),
    skipped: v.boolean(),
  }),
});

Connecting external CLIs

Your agent often needs to interact with tools like gh, npm, or git. With local(), the agent’s bash tool runs against the host shell directly — anything on $PATH is reachable. Host env vars are opt-in: only shell essentials (PATH, HOME, locale, etc.) are inherited by default, so you pass the specific vars your CLIs need via local({ env: { ... } }).

In GitHub Actions, this means you set the secrets you want the agent’s CLIs to see in the workflow env: block, then forward them explicitly into the sandbox. The runner is your isolation boundary; flue makes the inner boundary (host → spawned shell) explicit.

.flue/workflows/triage.ts:

import { defineAgent, defineWorkflow } from '@flue/runtime';
import { local } from '@flue/runtime/node';
import * as v from 'valibot';

const agent = defineAgent(() => ({
  sandbox: local({
    env: {
      GH_TOKEN: process.env.GH_TOKEN,
      NPM_TOKEN: process.env.NPM_TOKEN,
    },
  }),
  model: 'anthropic/claude-opus-4-7',
}));

export default defineWorkflow({
  agent,
  input: v.object({ issueNumber: v.number() }),

  async run({ harness, input }) {
    const session = await harness.session();
    const { data } = await session.skill('triage', {
      args: { issueNumber: input.issueNumber },
      result: v.object({
        severity: v.picklist(['low', 'medium', 'high', 'critical']),
        reproducible: v.boolean(),
        summary: v.string(),
        fix_applied: v.boolean(),
      }),
    });
    return data;
  },
});

If you want a tighter boundary — the agent can call a specific operation but never see the underlying token — return the custom tool from defineAgent(...) with tools: [...]. The tool implementation reads the secret from process.env; the agent only sees the tool’s parameters and result.

Subagents

Named subagents can run focused detached tasks:

const reviewer = defineAgentProfile({
  name: 'reviewer',
  instructions: 'Focus on correctness, security, and project standards.',
});
const agent = defineAgent(() => ({ model: 'anthropic/claude-sonnet-4-6', subagents: [reviewer] }));
async run({ harness, input }) {
  const { data } = await (await harness.session()).task(`Review this PR:\n${input.diff}`, {
  agent: 'reviewer',
    result: v.object({ approved: v.boolean(), comments: v.array(v.string()) }),
  });
  return data;
}

Sandbox context

The agent reads AGENTS.md and skills from its sandbox at runtime. CI agents typically use local(), which gives direct access to the runner’s checkout — so any files in your repo are visible automatically.

Skills are reusable agent tasks defined as markdown files in .agents/skills/. They give the agent a focused instruction set for a specific job:

.agents/skills/triage/SKILL.md:

---
name: triage
description: Triage a GitHub issue — reproduce, assess severity, and optionally fix.
---

Given the issue number in the arguments:

1. Use `gh issue view` to fetch the issue details
2. Read the codebase to understand the relevant area
3. Attempt to reproduce the issue
4. Assess severity and write a summary
5. If the fix is straightforward, apply it and open a PR

AGENTS.md at your project root is the agent’s system prompt — it provides global context about the project:

You are a helpful assistant working on the my-project codebase.

## Project structure

- `src/` — Application source code
- `tests/` — Test suite

## Guidelines

- Always run tests before suggesting a fix is complete
- Use the project's existing patterns and conventions

Wiring it into GitHub Actions

.github/workflows/issue-triage.yml:

name: Issue Triage

on:
  issues:
    types: [opened]

jobs:
  triage:
    runs-on: ubuntu-latest
    timeout-minutes: 30
    permissions:
      contents: read
      issues: write
    steps:
      - uses: actions/checkout@v4
      - uses: actions/setup-node@v4
        with:
          node-version: 22
      - run: npm ci
      - name: Run triage agent
        env:
          ANTHROPIC_API_KEY: ${{ secrets.ANTHROPIC_API_KEY }}
          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
        run: |
          npx flue run triage --target node \
            --input '{"issueNumber": ${{ github.event.issue.number }}}'

The --input flag passes JSON data to the workflow Action’s validated input. GITHUB_TOKEN is provided automatically by GitHub Actions.

Typed results and orchestration

Result schemas aren’t just for type safety — they’re how you orchestrate multi-step workflows. Because you get typed data back from prompt() and skill(), you can branch on results within a single agent:

import { defineAgent, defineWorkflow } from '@flue/runtime';
import { local } from '@flue/runtime/node';
import * as v from 'valibot';

const agent = defineAgent(() => ({ sandbox: local(), model: 'anthropic/claude-sonnet-4-6' }));

export default defineWorkflow({
  agent,
  input: v.object({ issueNumber: v.number() }),

  async run({ harness, input }) {
    const session = await harness.session();
    const { data } = await session.skill('triage', {
      args: { issueNumber: input.issueNumber },
      result: v.object({
        severity: v.picklist(['low', 'medium', 'high', 'critical']),
        reproducible: v.boolean(),
        summary: v.string(),
      }),
    });

    if (data.severity === 'critical' && data.reproducible) {
      await session.skill('auto-fix', {
        args: { issueNumber: input.issueNumber },
        result: v.object({ fix_applied: v.boolean(), pr_url: v.optional(v.string()) }),
      });
    }
    return data;
  },
});

This pattern — prompt or skill call, check the result, decide what to do next — is how you build sophisticated agents that go beyond single-shot prompts.

Running workflows locally

During development, flue run starts the configured application temporarily and runs the workflow in one step:

# Run with input
npx flue run triage --target node \
  --input '{"issueNumber": 42}'

# Pipe the result to jq
npx flue run triage --target node \
  --input '{"issueNumber": 42}' | jq '.severity'

The CLI invokes the workflow over the temporary application’s normal HTTP surface, so app.ts and middleware run. Progress goes to stderr and the final result to stdout.