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LazDaria/README.md

Spatial Omics Data Scientist

I am a postdoctoral fellow, working as a Spatial Omics Data Scientist in a collaborative project between the Huber Lab at EMBL and Cellzome (GSK). I apply and develop spatial omics analysis approaches to uncover spatial patterns influencing disease progression and response to therapies. During my PhD, I worked with the Children’s Cancer Research Institute in Vienna and the University of Zurich/ETH Zurich, where I developed workflows to study spatial and temporal dynamics in neuroblastoma through multiplexed imaging data analysis.

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  1. SegTraQ SegTraQ Public

    A Python toolkit for quantitative and visual quality control of segmentation and transcript assignment in spatial omics data.

    Python 17

  2. csbg/neuroblastoma csbg/neuroblastoma Public

    Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis

    Jupyter Notebook 11 1

  3. TaschnerMandlGroup/MapMetSC TaschnerMandlGroup/MapMetSC Public

    MAPping METastases in Neuroblastoma - spatially and temporally

    R 1 1

  4. TaschnerMandlGroup/MapMetIP TaschnerMandlGroup/MapMetIP Public

    Image processing pipeline for multi-modal images

    Python