Popular repositories Loading

1. VertAX VertAX Public

   A differentiable JAX-based framework for vertex modeling and inverse design of epithelial tissues

   Jupyter Notebook 17 2

2. foambryo foambryo Public

   Python package to infer tensions and pressures from 3D microscopy images of embryos and tissues

   Python 14 3

3. foambryo2D foambryo2D Public

   Python package to infer tensions from 2D microscopy images of embryos and tissues

   Jupyter Notebook 9 1

4. delaunay-watershed delaunay-watershed Public

   Python package to reconstruct a multimaterial nonmanifold surface mesh from 3D segmentation masks of tissues or nuclei

   Python 8 1

5. deltaMic deltaMic Public

   deltaMic: differentiable Microscopy image creator for cell shape inference with active mesh

   Python 7 2

6. ZAugNet ZAugNet Public

   ZAugNet

   Python 6 4