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Changes in this PR

Clearly and concisely summarize the changes you are making. Bullet points are completely okay. Please be specific, saying "improves X" is not enough!
Fixed bug where linear, non-directional, single cuts were copying and not just moving overhangs from the fragment sequence.

Why are you making these changes?

Otherwise this leaves the overhangs as part of the fragment sequence which can cause further downstream errors.

Are any changes breaking? (IMPORTANT)

NO

Pre-merge checklist

All of these must be satisfied before this PR is considered
ready for merging. Mergeable PRs will be prioritized for review.

  • New/changed functionality is thoroughly tested.
  • All code is properly formatted and linted.
  • The PR template is filled out.
… not just moving overhangs from the fragment sequence.
@TimothyStiles TimothyStiles merged commit f76bf05 into main Dec 1, 2023
@delete-merged-branch delete-merged-branch bot deleted the single-cut-not-removing-overhangs-regression branch December 1, 2023 06:53
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