A fast, scalable, and accurate local ancestry method.

Let your Claude able to think

Bayesian Data Analysis course at Aalto

Fast truncated singular value decompositions

A self-extracting archiving tool for Unix systems, in 100% shell script.

JupyterLab extension visualize data with Voyager

Visualization Tool for Data Exploration

Slides and examples for JupyterCon 2018

Persistent dict, backed by sqlite3 and pickle, multithread-safe.

Analysis of single cell RNA-seq data course

A Fine-Mapping pipeline

A graduate class for computational biologists on Inference and Models

notes from my 302 class on Bayesian methods and principles of statistics

modeling single cell abundance

YARN: Robust Multi-Tissue RNA-Seq Preprocessing and Normalization

Interactive Data Visualization in the browser, from Python

an R package for ancestry analysis

fastqcr: Quality Control of Sequencing Data

Local ancestry analysis pipeline for Stanford Clinical Genome Service and Undiagnosed Disease Network

Universal theme for Hugo, it stands out with its clean design and elegant typography.

Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow

A repo of short "vignettes" illustrating statistical concepts

A package that sabotages ASH.

Large-scale Bayesian variable selection for R and MATLAB.

Playing around with converting my thesis to the Bookdown format.

Covariance Inference and Decompositions for Tensor Datasets