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Hi there πŸ‘‹, my name is James

I am a bioinformatician / research software engineer, specialising in Nextflow pipelines and (ancient) metagenomics

My GitHub Stats Top Languagess
Note the top languages doesn't account for work on organisation repositories... my Nextflow amount is mucccch higher!

πŸ€– I like pipelines, metadata, standards, documenting, and community projects!

🧬 My current research focus is currently on improving throughput and reproducibility of (ancient) metagenomic analysis, and developing standards for (meta)data archiving and reporting of ancient DNA sequencing data.

πŸ‘ͺ I'm currently a core-team member of the nf-core initative of standardised Nextflow pipelines and I established the SPAAM-community of ancient metagenomics researchers and the MInAS intiative.

Skills

nextflow

r

bioconda

bash

git

linux


Research

orcid google-scholar


Contact

mastodon linked-in website


Current projects

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See my pinned repositories

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