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1. opencobra/cobrapy opencobra/cobrapy Public

   COBRApy is a package for constraint-based modeling of metabolic networks.

   Python 584 238

2. opencobra/optlang opencobra/optlang Public

   optlang - sympy based mathematical programming language

   Python 271 54

3. biosustain/cameo biosustain/cameo Public

   cameo - computer aided metabolic engineering & optimization

   Python 128 44

4. opencobra/memote opencobra/memote Public

   memote – the genome-scale metabolic model test suite

   HTML 151 32

5. opencobra/swiglpk opencobra/swiglpk Public

   Simple swig bindings for the GNU Linear Programming Kit

   Python 30 11

6. opencobra/MASS-Toolbox opencobra/MASS-Toolbox Public

   Mass Action Stoichiometric Simulation (MASS) Toolbox

   Mathematica 13 8