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1. yfukasawa/LongQC yfukasawa/LongQC Public

   LongQC is a tool for the data quality control of the PacBio and ONT long reads.

   C 180 20

2. dance dance Public

   Forked from OmicsML/dance

   DANCE: a deep learning library and benchmark platform for single-cell analysis

   Python

3. DeepCycle DeepCycle Public

   Forked from andreariba/DeepCycle

   Cell cycle inference in single-cell RNA-seq

   Python

4. pysam pysam Public

   Forked from pysam-developers/pysam

   Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

   Cython

5. scDeepCluster scDeepCluster Public

   Forked from ttgump/scDeepCluster

   scDeepCluster for Single Cell RNA-seq data

   Jupyter Notebook

6. biosustain/cameo biosustain/cameo Public

   cameo - computer aided metabolic engineering & optimization

   Python 124 45