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Achievement: YOLOAchievement: StarstruckAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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rubenchazarra/README.md

Hi there 👋

Welcome to my GitHub

I'm a bioinformatician and biotechologist currently performing my PhD in transcriptomics data analysis and tool development in the Transcriptomics and Functional Genomics Lab at the Barcelona Supercomputing Center.

Experienced in next generation sequencing (NGS) data analysis, workflow development, statistical analysis and high-performance computing.

Interests:

single-cell RNA-seq transcriptomics multi-omics
splicing pipeline development

Publications:

Coding in:

R  Python  Nextflow

🛠 Tools

GitHub  Conda  Docker  Visual Studio Code 

⚙️  GitHub Analytics

🤝🏻  Connect with Me

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  1. cellgeni/batchbench cellgeni/batchbench Public

    R 46 11

  2. sarek-nf-core sarek-nf-core Public

    Forked from nf-core/sarek

    Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

    Nextflow

  3. Transcript-Protein-Domain-Mapper Transcript-Protein-Domain-Mapper Public

    Method for retrieving and visualising the protein domains of any protein coding isoform and of different genomes. Enables joint visualisations representing alternative splicing events.

    R 2