I'm a passionate bioinformatics researcher dedicated to leveraging computational methods to solve biological problems. My work focuses on genomics, proteomics, and systems biology, with a particular interest in developing novel algorithms for biological data analysis.
- Genomics & Transcriptomics: RNA-seq analysis, variant calling, and genome assembly
- Structural Bioinformatics: Protein structure prediction and molecular dynamics simulations
- Systems Biology: Network analysis and pathway enrichment studies
- Machine Learning in Biology: Deep learning applications for biological sequence analysis
- Phylogenetics: Evolutionary analysis and comparative genomics
- Sequence Analysis: BLAST, BWA, STAR, HISAT2, Bowtie2
- Genomics: GATK, SAMtools, BCFtools, VCFtools
- RNA-seq: DESeq2, edgeR, Salmon, Kallisto
- Structural Biology: PyMOL, ChimeraX, GROMACS, OpenMM
- Machine Learning: scikit-learn, TensorFlow, PyTorch, Keras
- Data Visualization: matplotlib, seaborn, ggplot2, plotly
- NCBI (GenBank, PubMed, SRA)
- UniProt, PDB, Pfam
- KEGG, GO, Reactome
- TCGA, GTEx, UK Biobank
- 🧪 GenomeAnalyzer: A comprehensive pipeline for whole genome sequencing analysis
- 🦠 ProteinFoldNet: Deep learning model for protein secondary structure prediction
- 📈 BioVizToolkit: Interactive visualization tools for biological data
- 🌱 PlantGenomics: Comparative genomics analysis of plant species
- 📝 Published research in peer-reviewed bioinformatics journals
- 🎤 Presented findings at international bioinformatics conferences
- 🏅 Contributor to open-source bioinformatics projects
- 🎓 Certified in computational biology and data science
- "Novel approaches to protein structure prediction using deep learning" - Bioinformatics Journal (2024)
- "Comparative genomics analysis reveals evolutionary patterns in plant genomes" - Nature Computational Biology (2023)
- "Machine learning applications in RNA-seq data analysis" - BMC Bioinformatics (2023)
- Develop a new algorithm for multi-omics data integration
- Contribute to 5 open-source bioinformatics projects
- Complete advanced course in structural bioinformatics
- Present research at the ISMB conference
💡 "In the intersection of biology and computation lies the future of medicine"
📧 Feel free to reach out for collaborations or discussions about bioinformatics!